top of page
Short-Read CircRNA Encoded Peptides
Use criteria below to search among 5,854 circRNA peptides detected by short-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Short-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Long-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr22|23095246|23096418|+|1|circRNA|GNAZ|ENST00000615612.1|2 | circGNAZ(2) | GNAZ | LGRPRGTGLLQPLQRVPPGGQRGLLPERPGAHRRS | GLLPERPGAHRR | No | Alternative | Alternative | 12 | 1 | CTG | TGA | TransCirc | No |
chr22|23095246|23096418|+|1|circRNA|GNAZ|ENST00000615612.1|2 | circGNAZ(2) | GNAZ | LGSCLPGLSVPCGKRERCPIPCSLSGPAAARPWDVGKAQRKKKQPGGPGELTATCAQRASGNAAKSSCSCWAPATQARAPSSNR | QPGGPGELTATCAQR | No | Alternative | Alternative | 15 | 1 | CTG | TGA | TransCirc | No |
chr22|23095246|23096418|+|1|circRNA|GNAZ|ENST00000615612.1|2 | circGNAZ(2) | GNAZ | LQGVQAPHHLQCHRLADPHHPGPGRPQDRLPQPRPRLRRCAALCADGPR | CAALCADGPR | No | Alternative | Alternative | 10 | 1 | CTG | TGA | TransCirc | No |
chr22|23095246|23096418|+|1|circRNA|GNAZ|ENST00000615612.1|2 | circGNAZ(2) | GNAZ | LQGVQAPHHLQCHRLADPHHPGPGRPQDRLPQPRPRLRRCAALCADGPR | LADPHHPGPGRPQDR | No | Alternative | Alternative | 15 | 1 | CTG | TGA | TransCirc | No |
chr22|23095246|23096418|+|1|circRNA|GNAZ|ENST00000615612.1|2 | circGNAZ(2) | GNAZ | LWRTSSPSRSSPSRWWTWGGRGQSAKSGSTASRASQPSSSVWSSAATT | GQSAKSGSTASR | No | Alternative | Alternative | 12 | 1 | TTG | TGA | TransCirc | No |
Page 1 of 1
bottom of page