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Short-Read CircRNA Encoded Peptides
Use criteria below to search among 5,854 circRNA peptides detected by short-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Short-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Long-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr20|53571720|53583168|-|4|circRNA|ZNF217|ENST00000371471.6|5,4,3,2 | circZNF217(5,4,3,2) | ZNF217 | LPNGTLRLYAIESDRKHANSIPLNVHGWARSDWQLSWQSDGDGGCLVNERDRCCSIPSYTRKKCHPNRGVYALGLHVLQPDLHTFRRP | HANSIPLNVHGWAR | No | Alternative | Alternative | 14 | 1 | TTG | TAA | NA | No |
chr20|53571720|53583168|-|4|circRNA|ZNF217|ENST00000371471.6|5,4,3,2 | circZNF217(5,4,3,2) | ZNF217 | LPNGTLRLYAIESDRKHANSIPLNVHGWARSDWQLSWQSDGDGGCLVNERDRCCSIPSYTRKKCHPNRGVYALGLHVLQPDLHTFRRP | LYAIESDR | No | Alternative | Alternative | 8 | 1 | TTG | TAA | NA | No |
chr20|53571720|53583168|-|4|circRNA|ZNF217|ENST00000371471.6|5,4,3,2 | circZNF217(5,4,3,2) | ZNF217 | LPNGTLRLYAIESDRKHANSIPLNVHGWARSDWQLSWQSDGDGGCLVNERDRCCSIPSYTRKKCHPNRGVYALGLHVLQPDLHTFRRP | LYAIESDRK | No | Alternative | Alternative | 9 | 1 | TTG | TAA | NA | No |
chr20|53953431|53996050|-|6|circRNA|BCAS1|ENST00000448484.5|7,6,5,4,3,2 | circBCAS1(7,6,5,4,3,2) | BCAS1 | LTARKKKDKNLELRIALSLGTQKDWRLQRTIPRQQL | IALSLGTQKDWR | No | Alternative | Alternative | 12 | 2 | TTG | TAG | TransCirc | No |
chr20|53953431|53996050|-|6|circRNA|BCAS1|ENST00000448484.5|7,6,5,4,3,2 | circBCAS1(7,6,5,4,3,2) | BCAS1 | LTARKKKDKNLELRIALSLGTQKDWRLQRTIPRQQL | NLELRIALSLGTQK | No | Alternative | Alternative | 14 | 2 | TTG | TAG | TransCirc | No |
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