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Short-Read CircRNA Encoded Peptides
Use criteria below to search among 5,854 circRNA peptides detected by short-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Short-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Long-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr2|8770669|8776892|-|2|circRNA|KIDINS220|ENST00000496383.5|15,14 | circKIDINS220(15,14) | KIDINS220 | LRANQISFNWDRLASWINLTEQWPYRTSWLILYLEETEGIPDQMTLKTIYERTLTEEGRCRGPSLARCPLILQNCWLPRTGSVTSVPRP | CPLILQNCWLPRTGSVTSVPRP | No | Alternative | Junction | 22 | 3 | CTG | TGA | TransCirc | No |
chr2|8770669|8776892|-|2|circRNA|KIDINS220|ENST00000496383.5|15,14 | circKIDINS220(15,14) | KIDINS220 | LRANQISFNWDRLASWINLTEQWPYRTSWLILYLEETEGIPDQMTLKTIYERTLTEEGRCRGPSLARCPLILQNCWLPRTGSVTSVPRP | CRGPSLAR | No | Alternative | Junction | 8 | 3 | CTG | TGA | TransCirc | No |
chr2|8770669|8776892|-|2|circRNA|KIDINS220|ENST00000496383.5|15,14 | circKIDINS220(15,14) | KIDINS220 | LRANQISFNWDRLASWINLTEQWPYRTSWLILYLEETEGIPDQMTLKTIYERTLTEEGRCRGPSLARCPLILQNCWLPRTGSVTSVPRP | GPSLARCPLILQNCWLPR | No | Alternative | Junction | 18 | 3 | CTG | TGA | TransCirc | No |
chr2|8770669|8788812|-|8|circRNA|KIDINS220|ENST00000496383.5|15,14,13,12,11,10,9,8 | circKIDINS220(15,14,13,12,11,10,9,8) | KIDINS220 | LRANQISFNWDRLASWINLTEQWPYRTSWLILYLEETEGIPDQMTLKTIYESCHLLWWTKRRRELELGLGPQH | TIYESCHLLWWTK | No | Junction | Junction | 13 | 3 | CTG | TAG | TransCirc | No |
chr2|8770669|8788812|-|8|circRNA|KIDINS220|ENST00000496383.5|15,14,13,12,11,10,9,8 | circKIDINS220(15,14,13,12,11,10,9,8) | KIDINS220 | LRANQISFNWDRLASWINLTEQWPYRTSWLILYLEETEGIPDQMTLKTIYESCHLLWWTKRRRELELGLGPQH | TIYESCHLLWWTKR | No | Junction | Junction | 14 | 3 | CTG | TAG | TransCirc | No |
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