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Short-Read CircRNA Encoded Peptides

Use criteria below to search among 5,854 circRNA peptides detected by short-read sequencing:

*Click CircRNA to view comprehensive information in new page. 

*Short-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices"

​*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)

CircRNA
CircRNA UID
Gene
ORF
Peptide
ORF Found in Long-Read
Peptide Type
ORF Type
Peptide Length
Frame
Start Codon
Stop Codon
Ribo-Seq Peptide Support
Neoantigen Support
chr2|53866084|53928303|-|36|circRNA|PSME4|ENST00000404125.5|46,45,44,43,42,41,40,39,38,37,36,35,34,33,32,31,30,29,28,27,26,25,24,23,22,21,20,19,18,17,16,15,14,13,12,11
circPSME4(46,45,44,43,42,41,40,39,38,37,36,35,34,33,32,31,30,29,28,27,26,25,24,23,22,21,20,19,18,17,16,15,14,13,12,11)
PSME4
MTTGRNINSNSLMTNCLFSPIFLCHHAIMHRKNISCIRDINRTSPAHSYFKLCNWSSPQFGIRRQMVS
LCNWSSPQFGIR
No
Alternative
Junction
12
2
ATG
TGA
TransCirc
No
chr2|54621399|54623596|+|3|circRNA|SPTBN1|ENST00000356805.8|8,9,10
circSPTBN1(8,9,10)
SPTBN1
LEVLLFTIQSKMRANNQKVYMPREGKLISDINKTSAWTILMRSP
LISDINKTSAWTILMR
No
Junction
Junction
16
2
TTG
TAA
TransCirc
No
chr2|54816786|54829477|+|4|circRNA|EML6|ENST00000356458.6|3,4,5,6
circEML6(3,4,5,6)
EML6
MYACEEGFATGGRDGCIRLWDTDFKPITKIDLRETEQGYKAFSLCGVGCQKHSLHLGLEEGKTSGVSHRPF
AFSLCGVGCQKHSLHLGLEEGK
No
Alternative
Junction
22
1
ATG
TGA
TransCirc
No
chr2|54816786|54829477|+|4|circRNA|EML6|ENST00000356458.6|3,4,5,6
circEML6(3,4,5,6)
EML6
MYACEEGFATGGRDGCIRLWDTDFKPITKIDLRETEQGYKAFSLCGVGCQKHSLHLGLEEGKTSGVSHRPF
HSLHLGLEEGK
No
Alternative
Junction
11
1
ATG
TGA
TransCirc
No
chr2|54816786|54829477|+|4|circRNA|EML6|ENST00000356458.6|3,4,5,6
circEML6(3,4,5,6)
EML6
MYACEEGFATGGRDGCIRLWDTDFKPITKIDLRETEQGYKAFSLCGVGCQKHSLHLGLEEGKTSGVSHRPF
HSLHLGLEEGKTSGVSHRPF
No
Alternative
Junction
20
1
ATG
TGA
TransCirc
No
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