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Short-Read CircRNA Encoded Peptides
Use criteria below to search among 5,854 circRNA peptides detected by short-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Short-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Long-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr2|15292536|15330765|-|6|circRNA|NBAS|NM_015909|41,40,39,38,37,36 | circNBAS(41,40,39,38,37,36) | NBAS | MVTRHVTRHEHEAWPEDLISLTKQLHCYNERLLDFTQAQILQGLRKGVDVQRFTADDQYKRETILGLAEMK | ETILGLAEMK | No | Junction | Junction | 10 | 1 | ATG | TAG | TransCirc | No |
chr2|15308215|15379831|-|11|circRNA|NBAS|NM_015909|40,39,38,37,36,35,34,33,32,31,30 | circNBAS(40,39,38,37,36,35,34,33,32,31,30) | NBAS | MLTGALKSSPPLHYLSSWQRITIASRSMPDWPHVSGTSAILFTGYLQKAFCALVALKTSTWLDR | ITIASRSMPDWPHVSGTSAILFTGYLQK | No | Junction | Junction | 28 | 2 | ATG | TGA | TransCirc | No |
chr2|15308215|15379831|-|11|circRNA|NBAS|NM_015909|40,39,38,37,36,35,34,33,32,31,30 | circNBAS(40,39,38,37,36,35,34,33,32,31,30) | NBAS | MLTGALKSSPPLHYLSSWQRITIASRSMPDWPHVSGTSAILFTGYLQKAFCALVALKTSTWLDR | SMPDWPHVSGTSAILFTGYLQK | No | Junction | Junction | 22 | 2 | ATG | TGA | TransCirc | No |
chr2|15308215|15379831|-|11|circRNA|NBAS|NM_015909|40,39,38,37,36,35,34,33,32,31,30 | circNBAS(40,39,38,37,36,35,34,33,32,31,30) | NBAS | MLTGALKSSPPLHYLSSWQRITIASRSMPDWPHVSGTSAILFTGYLQKAFCALVALKTSTWLDR | SMPDWPHVSGTSAILFTGYLQKAFCALVALK | No | Junction | Junction | 31 | 2 | ATG | TGA | TransCirc | No |
chr2|159136193|159163546|+|2|circRNA|TANC1|ENST00000454300.5|5,6 | circTANC1(5,6) | TANC1 | LLPSGRRGDHRVSREHAAQSRILSWRWSSPLFSGLQLTNNATAQLSCRSRQEAQVCGKPQSAWRCSYNAIQRSSQANRA | CSYNAIQR | No | Alternative | Junction | 8 | 2 | CTG | TGA | TransCirc | No |
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