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Short-Read CircRNA Encoded Peptides
Use criteria below to search among 5,854 circRNA peptides detected by short-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Short-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Long-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr5|90853283|90863857|+|4|circRNA|ADGRV1|NM_032119|80,81,82,83 | circADGRV1(80,81,82,83) | ADGRV1 | LIVAHICQYWLFTGILSKSMDTSLKERKEITFEFQRGYWMSRMQK | EITFEFQRGYWMSR | No | Alternative | Alternative | 14 | 2 | TTG | TAA | NA | No |
chr5|90853283|90863857|+|4|circRNA|ADGRV1|NM_032119|80,81,82,83 | circADGRV1(80,81,82,83) | ADGRV1 | LIVAHICQYWLFTGILSKSMDTSLKERKEITFEFQRGYWMSRMQK | GYWMSRMQK | No | Alternative | Alternative | 9 | 2 | TTG | TAA | NA | No |
chr5|90853283|90863857|+|4|circRNA|ADGRV1|NM_032119|80,81,82,83 | circADGRV1(80,81,82,83) | ADGRV1 | LIVAHICQYWLFTGILSKSMDTSLKERKEITFEFQRGYWMSRMQK | LIVAHICQYWLFTGILSK | No | Alternative | Alternative | 18 | 2 | TTG | TAA | NA | No |
chr5|90853283|90863857|+|4|circRNA|ADGRV1|NM_032119|80,81,82,83 | circADGRV1(80,81,82,83) | ADGRV1 | LIVAHICQYWLFTGILSKSMDTSLKERKEITFEFQRGYWMSRMQK | LIVAHICQYWLFTGILSKSMDTSLK | No | Alternative | Alternative | 25 | 2 | TTG | TAA | NA | No |
chr5|9108139|9122837|-|3|circRNA|SEMA5A|ENST00000382496.9|16,15,14 | circSEMA5A(16,15,14) | SEMA5A | MNICYVPHTCSGQAGVLGNGAQPNAGVAFKLAAGSVRMGLTVQAAM | LAAGSVR | No | Alternative | Alternative | 7 | 3 | ATG | TGA | TransCirc | No |
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