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Short-Read CircRNA Encoded Peptides
Use criteria below to search among 5,854 circRNA peptides detected by short-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Short-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Long-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr5|14286870|14316743|+|6|circRNA|TRIO|ENST00000344204.8|4,5,6,7,8,9 | circTRIO(4,5,6,7,8,9) | TRIO | LTPGSSDSLTASANYSKAVHHVLDVIHEVLHHQRQLENIWQHRKVRLHQRLQLCVFQQDVQQRGGLQAWLHGDRGHAWVQVGLHQAPSEDPAGVLPLLHPCGPDHQARQLLAETED | LHQRLQLCVFQQDVQQR | No | Junction | Junction | 17 | 1 | TTG | TAA | riboCIRC | No |
chr5|14290715|14316743|+|5|circRNA|TRIO|ENST00000344204.8|5,6,7,8,9 | circTRIO(5,6,7,8,9) | TRIO | LATPQGPAASEAAAVCFPAGRSADKYGLFRRPYQSS | LATPQGPAASEAAAVCFPAGR | No | Alternative | Junction | 21 | 3 | CTG | TGA | riboCIRC,TransCirc | No |
chr5|143056086|143057640|+|1|ciRNA|ARHGAP26|ENST00000274498.8|16 | ciARHGAP26(16) | ARHGAP26 | LSLFSGAALGVQLTGSISSHHHLGFDFLMTIFLATLFQKAPLKGLPDLVMLATQYAHKTGL | APLKGLPDLVMLATQYAHK | No | Alternative | Alternative | 19 | 2 | CTG | TAA | NA | No |
chr5|143056086|143057640|+|1|ciRNA|ARHGAP26|ENST00000274498.8|16 | ciARHGAP26(16) | ARHGAP26 | MFWCPYLLIVVPLKQEGESQERRWCLCHFFLEKLQTHSNHSLLKPHISSINRCDEYHQSICQSNKATYLGSTKRM | ATYLGSTK | No | Alternative | Alternative | 8 | 3 | ATG | TGA | NA | No |
chr5|143056086|143057640|+|1|ciRNA|ARHGAP26|ENST00000274498.8|16 | ciARHGAP26(16) | ARHGAP26 | MFWCPYLLIVVPLKQEGESQERRWCLCHFFLEKLQTHSNHSLLKPHISSINRCDEYHQSICQSNKATYLGSTKRM | QEGESQERR | No | Alternative | Alternative | 9 | 3 | ATG | TGA | NA | No |
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