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Short-Read CircRNA Encoded Peptides
Use criteria below to search among 5,854 circRNA peptides detected by short-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Short-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Long-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr7|158679959|158689953|-|6|circRNA|NCAPG2|NM_001281932|12,11,10,9,8,7 | circNCAPG2(12,11,10,9,8,7) | NCAPG2 | LKFDQMLHCCLLKHFLLGIQTFMLLKWIVKSRNSLKSSMVQTYVGFGVSIKLYIALIMIWRKVEKLKICYLSAS | FDQMLHCCLLKHFLLGIQTFMLLK | No | Alternative | Junction | 24 | 2 | CTG | TAA | TransCirc | No |
chr7|158679959|158689953|-|6|circRNA|NCAPG2|NM_001281932|12,11,10,9,8,7 | circNCAPG2(12,11,10,9,8,7) | NCAPG2 | LKFDQMLHCCLLKHFLLGIQTFMLLKWIVKSRNSLKSSMVQTYVGFGVSIKLYIALIMIWRKVEKLKICYLSAS | HFLLGIQTFMLLK | No | Alternative | Junction | 13 | 2 | CTG | TAA | TransCirc | No |
chr7|158739022|158741896|-|2|circRNA|ESYT2|ENST00000251527.9|18,17 | circESYT2(18,17) | ESYT2 | MPAGAPSRKARKASRPPTLSSSQTSLCVQRGEENIHQISYVWVSRPWWQQHSSIHTSHWGQ | MPAGAPSR | No | Junction | Junction | 8 | 3 | ATG | TGA | TransCirc | No |
chr7|158869854|158871562|+|2|circRNA|WDR60|ENST00000407559.7|2,3 | circWDR60(2,3) | WDR60 | LRWTFLNIRSRGAGIPTRMPGAETGWPKSTPLRRVLVGRGTETDRGRGEETQKTGRKKS | GAGIPTR | No | Alternative | Alternative | 7 | 2 | CTG | TGA | riboCIRC,TransCirc | No |
chr7|158869854|158871562|+|2|circRNA|WDR60|ENST00000407559.7|2,3 | circWDR60(2,3) | WDR60 | LRWTFLNIRSRGAGIPTRMPGAETGWPKSTPLRRVLVGRGTETDRGRGEETQKTGRKKS | MPGAETGWPK | No | Alternative | Alternative | 10 | 2 | CTG | TGA | riboCIRC,TransCirc | No |
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