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Long-Read CircRNA Encoded Peptides
Use criteria below to search among 994 circRNA peptides detected by long-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Long-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|number of exons|exon sizes|exon offsets"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Short-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr5|151458787|151467925|2|89,123|0,9015 | circSLC36A1(1S,S6) | SLC36A1 | MSTQRLRNEDYHDYSSTDVSPEESPSEGFLPFLVLLVFIRNLRALSIFSLLANITMLVSLVMIYQFIVQLPCPRRDFGMKTTTTTAPRT | TTTTTAPR | No | Alternative | Junction | 8 | 3 | ATG | TGA | TransCirc | No |
chr5|151786571|151791062|3|31,82,174|0,3751,4317 | circG3BP1(NE,NE,2L) | G3BP1 | LDIFDSFPPRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHRKVMSQNFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNNQALRRFMQTFVLAPEVWTYLTLFPPDFMERTLLMSMGDWIQMESQQMQSTDRKKSTGK | LDIFDSFPPR | Yes | Alternative | Junction | 10 | 3 | TTG | TGA | NA | Yes |
chr5|154191266|154294906|2|145,91|0,103549 | circGALNT10(NE,NE) | GALNT10 | MTRRPSGGTLPFCPRLVFLDVFQRISFEGSYLHPCIPG | RPSGGTLPFCPRLVFLDVFQR | No | Junction | Junction | 21 | 3 | ATG | TGA | NA | Yes |
chr5|168423656|168423895|1|239|0 | circWWC1(NE).A | WWC1 | LDSELQSKVEFLLLEGATGFRPSGCITTIHEDEVAKTQKAEGGGRLQALRSLSGTPKSMTSLSPRSSLSSPSPPMTPLSSWTQSCRARWSSCSWRGPPASGPQAASPPSTRMRWPRPRRQREVAACRLCVPCLAPQSP | WSSCSWRGPPASGPQAASPPSTR | Yes | Alternative | Junction | 23 | 1 | CTG | TGA | TransCirc | Yes |
chr5|172932435|172935310|2|101,123|0,2752 | circERGIC1(NE,S1) | ERGIC1 | LCPRFMRTRVASSGTPTSTRWPTRNTSPTATRAASSLQSGSATTSAPSRSSTQRDGSRCTDSSPRPGLPRLHPEDCAHGL | VASSGTPTSTRWPTR | No | Alternative | Junction | 15 | 1 | TTG | TGA | TransCirc | Yes |
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