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Long-Read CircRNA Encoded Peptides
Use criteria below to search among 994 circRNA peptides detected by long-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Long-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|number of exons|exon sizes|exon offsets"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Short-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr18|49929511|49937397|4|87,98,38,63|0,6740,7733,7823 | circMYO5B(NE,NE,NE,NE) | MYO5B | LFHDDKDPVPATTPGSPTRSTRKPLATSSVPPCICSWRP | KPLATSSVPPCICSWRP | No | Junction | Junction | 17 | 1 | TTG | TGA | TransCirc | Yes |
chr18|49929511|49937397|4|87,98,38,63|0,6740,7733,7823 | circMYO5B(NE,NE,NE,NE) | MYO5B | LTCFMMTRTLFLPPPLGLQQGAQENRWPPVPYLPASAHGDPECHDTSLCPLHQAQR | LTCFMMTRTLFLPPPLGLQQGAQENR | No | Alternative | Junction | 26 | 2 | CTG | TGA | TransCirc | Yes |
chr18|49929511|49937397|4|87,98,38,63|0,6740,7733,7823 | circMYO5B(NE,NE,NE,NE) | MYO5B | LTCFMMTRTLFLPPPLGLQQGAQENRWPPVPYLPASAHGDPECHDTSLCPLHQAQR | TLFLPPPLGLQQGAQENR | No | Alternative | Junction | 18 | 2 | CTG | TGA | TransCirc | Yes |
chr18|49929511|49954435|3|87,86,123|0,6740,24801 | NA | MYO5B | MSNTAFIIVHFADKLHLLMETLNATTPHYVRCIKPNDEKLPFHFDPKRAVQQLRACGVLETIRISAAGYPSRSPKELTRTGLRSSMTGTPAASTSRSPACPTRPSSSSTLQTSCICSWRP | ELTRTGLR | No | Alternative | Junction | 8 | 1 | ATG | TGA | TransCirc | No |
chr18|49929511|49954435|3|87,86,123|0,6740,24801 | NA | MYO5B | MSNTAFIIVHFADKLHLLMETLNATTPHYVRCIKPNDEKLPFHFDPKRAVQQLRACGVLETIRISAAGYPSRSPKELTRTGLRSSMTGTPAASTSRSPACPTRPSSSSTLQTSCICSWRP | MSNTAFIIVHFADKLHLLMETLNATTPHYVR | No | Alternative | Junction | 31 | 1 | ATG | TGA | TransCirc | Yes |
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