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Long-Read CircRNA Encoded Peptides
Use criteria below to search among 994 circRNA peptides detected by long-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Long-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|number of exons|exon sizes|exon offsets"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Short-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr17|44780709|44780876|1|167|0 | circADAM11(NE) | ADAM11 | MQEEVGKGGLMDDPRLLEVLKAPSSPFHSLPPFQSRVVGKARGGPVPGGLGSLPGICKRK | MQEEVGKGGLMDDPR | No | Alternative | Junction | 15 | 3 | ATG | TAG | NA | Yes |
chr17|45158144|45158342|1|198|0 | circENST00000452741(NE) | ENST00000452741 | MRISLSGCPLVVAVKSWTLILPDGQILGSSDYVNASKIIGAVGKPALPKCGLSCP | MRISLSGCPLVVAVK | No | Alternative | Junction | 15 | 2 | ATG | TAG | NA | Yes |
chr17|4539604|4539840|1|236|0 | circMYBBP1A(S3S) | MYBBP1A | MGRKKRNRTKAKVPAQANGTPTTKSPAPGAPTRSPSTPAKSPKLQKKNQKPSQVNGAPGMARQRRMAHLQPPAGASPPAWAGRRGTGQRLRSQPRQTGRQPPRVQPLAPPPGAPAPLPNPQNCRRKTRSRPR | GTGQRLR | No | Alternative | Junction | 7 | 1 | ATG | TGA | TransCirc | No |
chr17|47957581|47957822|1|241|0 | circPRR15L(L1S) | PRR15L | LEVRPFLEKQLSVGAAWEGETREASGASGLLYQARLSQERWVGAAARQPWRQNQVL | EASGASGLLYQARLSQER | Yes | Alternative | Junction | 18 | 2 | CTG | TGA | NA | Yes |
chr17|47957581|47957822|1|241|0 | circPRR15L(L1S) | PRR15L | LEVRPFLEKQLSVGAAWEGETREASGASGLLYQARLSQERWVGAAARQPWRQNQVL | WVGAAAR | Yes | Alternative | Junction | 7 | 2 | CTG | TGA | NA | No |
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