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Long-Read CircRNA Encoded Peptides
Use criteria below to search among 994 circRNA peptides detected by long-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Long-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|number of exons|exon sizes|exon offsets"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Short-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr14|75121118|75124145|2|56,100|0,2927 | circNEK9(NE,NE) | NEK9 | LSWNIVMEGTCMTKSFVRRTSCLRKRLLFWHCCSTTTLLPTTITSWTIPRC | LSWNIVMEGTCMTK | No | Alternative | Junction | 14 | 2 | TTG | TGA | TransCirc | Yes |
chr14|75863666|75902224|3|196,99,27|0,19018,38531 | circTTLL5(NE,NE,S1).A | TTLL5 | LQTGGFAWEGEVENNVYSQATGVVPQHKYHPTAGSYQLQFALQQLEQQKLQSRQLLDQSRARHQAIFGSQTLPNSNLWTMNNGAGCRISSATASGQKPLCPSPALQEPADRGICLGRRSRKQRVQPGYRGGPPAQVSPHSRQLSASICPAAT | ISSATASGQKPLCPSPALQEPADRGICLGR | No | Junction | Junction | 30 | 2 | CTG | TGA | TransCirc | Yes |
chr14|75882684|75902224|2|218,83|0,19457 | circTTLL5(NE,1) | TTLL5 | MVQVVEFPVPQLVARSQPLCHKKWYHLQVLAPPWFPNPHPTTNKCSEGQHPRKLPKGPPRKGS | LPKGPPR | No | Alternative | Junction | 7 | 2 | ATG | TGA | TransCirc | No |
chr14|77027928|77028137|1|209|0 | circIRF2BPL(L1S) | IRF2BPL | LNPSAARAVEPPRRGAAPAVETRVPSSPGHPRPLPSGRELPAQVCSTRKKAPELPSRRVNRSRRWGRREG | LPAQVCSTRK | No | Alternative | Junction | 10 | 1 | CTG | TGA | NA | No |
chr14|77027928|77028137|1|209|0 | circIRF2BPL(L1S) | IRF2BPL | LSSPRDESTAVGGGGEERAEPVRCPGGGAPTARRCAGGGDSRSLQPRAPSPPPLGPGASSPSLQHQEEGA | CAGGGDSR | No | Alternative | Junction | 8 | 3 | CTG | TGA | NA | No |
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