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Long-Read CircRNA Encoded Peptides
Use criteria below to search among 994 circRNA peptides detected by long-read sequencing:
*Click CircRNA to view comprehensive information in new page.
*Long-read circRNA IDs are unique identifiers assigned to each circRNA in the format of "chromosome|start position|end position|number of exons|exon sizes|exon offsets"
*CircRNA UID (universal identifiers) are named according to nomenclature standards (PMID: 36658223)
CircRNA | CircRNA UID | Gene | ORF | Peptide | ORF Found in Short-Read | Peptide Type | ORF Type | Peptide Length | Frame | Start Codon | Stop Codon | Ribo-Seq Peptide Support | Neoantigen Support |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr14|20343123|20343407|1|284|0 | circRPPH1(S1) | RPPH1 | LGRSETRARGGPNRALPELRGGEFPENGAPREVRLGRRCRGPRPSGRGPADASFAGAWNRLTASEVSSMAEVRAEGSSSVGPRAECVLSLHSHVPWEGLRLGPEAALTGLSLSFGEVSSQRTGLRARSDWAGDAVDPALRGGARRMPPLPELGTDSRPAK | AEGSSSVGPR | Yes | Alternative | Junction | 10 | 1 | TTG | TGA | riboCIRC | Yes |
chr14|20343142|20343333|1|191|0 | circENST00000554988(S1S) | ENST00000554988 | LGRRCRGPRPSGRGPADASFAGAWNRLTASEVSLRLGPEAALTGLSLSFGEVSSQRTGLRARSDWAGDAVDPALRGGARRMPPLPELGTDSRPAK | GPADASFAGAWNRLTASEVSLR | No | Junction | Junction | 22 | 2 | CTG | TGA | riboCIRC,TransCirc | Yes |
chr14|20343142|20343407|1|265|0 | circRPPH1(S1).A | RPPH1 | LGRSETRARGGPNRALPELRGGEFPENGAPREVRLGRRCRGPRPSGRGPADASFAGAWNRLTASEVRRREAHQWGHELSASCHSTPMSLGKV | GPADASFAGAWNRLTASEVR | No | Junction | Junction | 20 | 1 | TTG | TGA | riboCIRC | Yes |
chr14|20343142|20343407|1|265|0 | circRPPH1(S1).A | RPPH1 | MPWTPPFGEGPGGCLLCRSLEQTHGQRSEAEGSSSVGPRAECVLSLHSHVPWEGLRLGPEAALTGLSLSFGEVSSQRTGLRARSDWAGDAVDPALRGGARRMPPLPELGTDSRPAK | SEAEGSSSVGPR | No | Junction | Junction | 12 | 3 | ATG | TGA | riboCIRC | Yes |
chr14|20343146|20343407|1|261|0 | circRPPH1(S1).B | RPPH1 | LGRSETRARGGPNRALPELRGGEFPENGAPREVRLGRRCRGPRPSGRGPADASFAGAWNRLTASEGGGKLISGATS | GPADASFAGAWNRLTASEGGGK | No | Junction | Junction | 22 | 1 | TTG | TGA | riboCIRC,TransCirc | Yes |
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