top of page
McDonnell Genome Institute
Washington University
Transcript
SNAI3-AS1:21
Chromosome
chr16
Gene Name
SNAI3-AS1
Start
88663364
CPC Label
noncoding
End
88677751
Cancer
BRCA-HER2-enriched
Strand
+
Peptide
RVDVMSEDLGGER
Modified Peptide
n[145]RVDVM[147]SEDLGGER
Peptide Length
13
ORF Length
88
Open Reading Frame (ORF)
LLRGPQIYPAQDWEMGGDQDPQGFPRLPPSPRHHWTVTETPASSVLRSCSLLSILAPPPARRKDSDTAPGRGRRVDVMSEDLGGERKA
Conservation Score
0.015
PhyloCSF Frame 1
-3.373
No. of Spectra
29
CPC Coding Probability
0.380599
PhyloCSF Frame 2
-4.576
CNTI Index
noncoding
Max Probability
0.9999
PhyloCSF Frame 3
-3.757
CNTI Score
-0.282565964
bottom of page