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McDonnell Genome Institute

Washington University

Transcript

lnc-ZNF783-3:8

Chromosome

chr7

Gene Name

lnc-ZNF783-3

Start

149294088

CPC Label

coding

End

149297302

Cancer

PRAD

Strand

+

Peptide

WMNGGALGGTAQGGTRQRTMGADGG

Modified Peptide

WM[147]NGGALGGTAQGGTRQRTM[147]GADGG

Peptide Length

25

ORF Length

37

Open Reading Frame (ORF)

LGREDPRAKAQRWMNGGALGGTAQGGTRQRTMGADGG

Conservation Score

0.166

PhyloCSF Frame 1

-4.138

No. of Spectra

11

CPC Coding Probability

0.95325

PhyloCSF Frame 2 

-4.199

CNTI Index

noncoding

Max Probability

0.8326

PhyloCSF Frame 3

-3.06

CNTI Score

-0.245667192

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