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McDonnell Genome Institute

Washington University

Transcript

lnc-ZGRF1-3:1

Chromosome

chr4

Gene Name

lnc-ZGRF1-3

Start

112880459

CPC Label

noncoding

End

112882330

Cancer

BRCA-HER2-enriched

Strand

-

Peptide

LFMGGLSFETTDESLR

Modified Peptide

n[145]LFMGGLSFETTDESLR

Peptide Length

16

ORF Length

61

Open Reading Frame (ORF)

LPVDTAEEASLKSLFPGPSCPKEPEQLRKLFMGGLSFETTDESLRSPSEQWRRLTDCVDSK

Conservation Score

1

PhyloCSF Frame 1

0

No. of Spectra

2

CPC Coding Probability

0.0119851

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.719

PhyloCSF Frame 3

0

CNTI Score

-0.351841712

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