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McDonnell Genome Institute

Washington University

Transcript

lnc-VPS26C-2:1

Chromosome

chr21

Gene Name

lnc-VPS26C-2

Start

37363116

CPC Label

coding

End

37367912

Cancer

CCRC

Strand

-

Peptide

GAAAFGR

Modified Peptide

n[230]GAAAFGR

Peptide Length

7

ORF Length

157

Open Reading Frame (ORF)

LCAIARRLPAAPPRPAPAPTAARGARAASRAAAPAALAPRASASAPAAPPAPGGGAGCPGRGRGRRRGAAAFGRGPGKPTPRARAWRALTAVRAPRSPLSPGSAAAATVRAWSRFFEGLAGLLAGKCRRRPWWGRGGATAAPQTSQEFRTLRRARRP

Conservation Score

1

PhyloCSF Frame 1

0

No. of Spectra

1

CPC Coding Probability

0.950584

PhyloCSF Frame 2 

1.994

CNTI Index

coding

Max Probability

0.7224

PhyloCSF Frame 3

5.448

CNTI Score

0.80297055

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