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McDonnell Genome Institute
Washington University
Transcript
lnc-VN1R2-5:11
Chromosome
chr19
Gene Name
lnc-VN1R2-5
Start
53197100
CPC Label
coding
End
53216996
Cancer
OSCC
Strand
+
Peptide
ELPPKENNSTGK
Modified Peptide
n[145]ELPPKENNSTGK
Peptide Length
12
ORF Length
555
Open Reading Frame (ORF)
LCRSRWEPQARAVPIWPSCQQIPNFCIFNGDEVSPCWPPGLELLTSDVSPTHMIKELPPKENNSTGKVFQAVMLERHEIHDIQDFYFREMQQNIHDFECQCHNDERNYREIPAIKIKNITGRRDQGDGRNAGNKPVENQLELSFWLHLAELQGFQIERKIYECNQIEKSVTRGSSVSLLQTNLPCVNTSISNIYRNDFMHPSLLTQDQKAYIREKPYKCSDCGKAFNQRSNLTTHQRIHTGQKPHKCDICGKGFRRIANLASHHRIHTGEKPYRCNECGKTFNQTFNLTTHQRIHTGQKPYKCDRCGKGFRQIGNLASHHRIHTGEKPYRCNECGKTFNRMFHLTRHQRIHTGQKPYKCDICGKGFRQIANLASHHRIHTGEKPYKCSDCGKTFNYRSHLTRHQRIHTGQKPYKCDTCGKDFSQNSYLENHQRIHTREKSYRCNECGKTFNKMTNLTTHQRIHTGQKTYKCDICGKGFRQIGNLASHHRIHTGEKPYRCNECGKTFNRMFHLTRHQRIHTGQKPYKCDICGKSFSQNSYLENHQRIHTGEKTYKL
Conservation Score
1
PhyloCSF Frame 1
7.923
No. of Spectra
1
CPC Coding Probability
0.999964
PhyloCSF Frame 2
0
CNTI Index
coding
Max Probability
0.6562
PhyloCSF Frame 3
0
CNTI Score
0.625289065
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