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McDonnell Genome Institute
Washington University
Transcript
lnc-VN1R2-5:10
Chromosome
chr19
Gene Name
lnc-VN1R2-5
Start
53197100
CPC Label
coding
End
53216996
Cancer
EOGC
Strand
+
Peptide
SITSMLGQGKEPWTVESEVK
Modified Peptide
n[145]SITSMLGQGKEPWTVESEVK
Peptide Length
20
ORF Length
143
Open Reading Frame (ORF)
MALSQGRLTFRDVAIEFSQEEWKCLDPAQRALYRDVMLENYRNLVSLGISLSEMSITSMLGQGKEPWTVESEVKITKTSSGWECIKGVNTGKSSNGQRGSCTISIQVTPSELKSSVEQKGFKSCELSMETFLCPHLSLCSSDV
Conservation Score
1
PhyloCSF Frame 1
-3.937
No. of Spectra
1
CPC Coding Probability
0.999926
PhyloCSF Frame 2
-2.605
CNTI Index
coding
Max Probability
0.0761
PhyloCSF Frame 3
8.486
CNTI Score
0.625289065
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