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McDonnell Genome Institute
Washington University
Transcript
lnc-VCAN-1:7
Chromosome
chr5
Gene Name
lnc-VCAN-1
Start
84382397
CPC Label
noncoding
End
84392411
Cancer
HCC
Strand
+
Peptide
IESEIYLFK
Modified Peptide
n[230]IESEIYLFK
Peptide Length
9
ORF Length
63
Open Reading Frame (ORF)
MIKSSTPTIAGVMWLSREKRIIIGQRTVLDYFPFYLVFIAIFFSFPPFITLLKIESEIYLFKI
Conservation Score
0.974
PhyloCSF Frame 1
-5.88
No. of Spectra
10
CPC Coding Probability
0.0305825
PhyloCSF Frame 2
-5.457
CNTI Index
coding
Max Probability
0.9977
PhyloCSF Frame 3
-4.73
CNTI Score
0.629222092
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