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McDonnell Genome Institute
Washington University
Transcript
lnc-VAPA-1:1
Chromosome
chr18
Gene Name
lnc-VAPA-1
Start
10017465
CPC Label
noncoding
End
10020824
Cancer
BRCA-Luminal B
Strand
+
Peptide
QVSADLK
Modified Peptide
n[145]QVSADLK
Peptide Length
7
ORF Length
45
Open Reading Frame (ORF)
LQLELEGKCISIEGRSVTVSRQVSADLKRIMSTGQWLRGRRRQIS
Conservation Score
0.865
PhyloCSF Frame 1
-4.729
No. of Spectra
34
CPC Coding Probability
0.0167185
PhyloCSF Frame 2
-4.883
CNTI Index
noncoding
Max Probability
0.9998
PhyloCSF Frame 3
-5.773
CNTI Score
-0.480918632
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