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McDonnell Genome Institute
Washington University
Transcript
lnc-USP53-13:1
Chromosome
chr4
Gene Name
lnc-USP53-13
Start
120342055
CPC Label
coding
End
120342647
Cancer
BRCA-Basal-like
Strand
+
Peptide
LLFVGLNNTDK
Modified Peptide
n[145]LLFVGLNNTDK
Peptide Length
11
ORF Length
190
Open Reading Frame (ORF)
MSFIFEWICSGFSSVPQFLGLNKKSGKLLFVGLNNTDKTILLHMIKDDRLGQHIPTLHLTSKELTIVGMTFTTFDLGQHEQACRVWKNCLPAMNGVIFLVDCADHSCLIESKVELNSLMADETISTMPILILGNKIDRTDTISAEKLGEIFGLYGQTTGKGNVTLKQLNVRPAEVFTCSVLQRQTYREGF
Conservation Score
1
PhyloCSF Frame 1
0
No. of Spectra
8
CPC Coding Probability
0.997233
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.8596
PhyloCSF Frame 3
0
CNTI Score
-0.398095489
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