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McDonnell Genome Institute
Washington University
Transcript
lnc-USP12-9:3
Chromosome
chr13
Gene Name
lnc-USP12-9
Start
27190660
CPC Label
coding
End
27251260
Cancer
BRCA-HER2-enriched
Strand
-
Peptide
WADGLLK
Modified Peptide
n[145]WADGLLK
Peptide Length
7
ORF Length
146
Open Reading Frame (ORF)
MPTQNLRLQPWLPPTPLPEISPGAEGASSGFGQTPRGALTVQRWADGLLKRGQSGRRGQGGAKSEQGLPARCHLSVQSQLTAASDSLQLLTHCSLCLPGSSNPSTSASRVAGTTDMHHQAWLIFVYFCRDRVSPCCPGWSRTPGLK
Conservation Score
0.331
PhyloCSF Frame 1
0
No. of Spectra
45
CPC Coding Probability
0.5
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.9966
PhyloCSF Frame 3
0
CNTI Score
-0.308490218
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