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McDonnell Genome Institute

Washington University

Transcript

lnc-UPF3A-1:1

Chromosome

chr13

Gene Name

lnc-UPF3A-1

Start

114306645

CPC Label

noncoding

End

114307066

Cancer

CCRC

Strand

+

Peptide

MGPGSLR

Modified Peptide

n[230]MGPGSLR

Peptide Length

7

ORF Length

70

Open Reading Frame (ORF)

LCHTHRLCSCLLVLLDIKGRLVVCFINEPQLQVDFHTRMNEDSDITFHFQVFFGRCVVMNSVRMGPGSLR

Conservation Score

0.404

PhyloCSF Frame 1

0

No. of Spectra

34

CPC Coding Probability

0.0135017

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.9973

PhyloCSF Frame 3

0

CNTI Score

-0.346192096

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