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McDonnell Genome Institute
Washington University
Transcript
lnc-UGGT1-3:1
Chromosome
chr2
Gene Name
lnc-UGGT1-3
Start
128203360
CPC Label
coding
End
128203775
Cancer
BRCA-HER2-enriched
Strand
+
Peptide
ALVGGACTQVR
Modified Peptide
n[145]ALVGGACTQVR
Peptide Length
11
ORF Length
103
Open Reading Frame (ORF)
MVFRHFVEVGQVAYISGPHAGKLVAIIDVVDENRALVGGACTQVRRQAMPFKCMQLTDFILKFPPSAHPRGMAKKPGRRQPSIQNGQAHNGPRRVKPKKGKPK
Conservation Score
1
PhyloCSF Frame 1
0
No. of Spectra
1
CPC Coding Probability
0.50873
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.5039
PhyloCSF Frame 3
0
CNTI Score
-0.366365258
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