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McDonnell Genome Institute

Washington University

Transcript

lnc-UGCG-4:1

Chromosome

chr9

Gene Name

lnc-UGCG-4

Start

111969362

CPC Label

noncoding

End

111971514

Cancer

BRCA-Basal-like

Strand

+

Peptide

QAHWVMTK

Modified Peptide

n[145]QAHWVM[147]TK

Peptide Length

8

ORF Length

39

Open Reading Frame (ORF)

MQAHWVMTKSQLAGHMGLSQPLILLLIAFISPSFPLTFM

Conservation Score

0.069

PhyloCSF Frame 1

-5.633

No. of Spectra

7

CPC Coding Probability

0.407747

PhyloCSF Frame 2 

-3.499

CNTI Index

noncoding

Max Probability

0.9966

PhyloCSF Frame 3

-6.051

CNTI Score

-0.368122391

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