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McDonnell Genome Institute
Washington University
Transcript
lnc-UBP1-5:1
Chromosome
chr3
Gene Name
lnc-UBP1-5
Start
33682978
CPC Label
noncoding
End
33688368
Cancer
BRCA-HER2-enriched
Strand
-
Peptide
LIPHLCILFGDSNSQVR
Modified Peptide
n[145]LIPHLCILFGDSNSQVR
Peptide Length
17
ORF Length
109
Open Reading Frame (ORF)
LASGFKHKNFRSREGVCLCLIETLNIFGAQPLVISKLIPHLCILFGDSNSQVRDAAILAIVEIYRHVGEKVRMDLYKRGIPPARQGLALLPRLQCSVTISAYCNLHLPG
Conservation Score
1
PhyloCSF Frame 1
0
No. of Spectra
16
CPC Coding Probability
0.0191126
PhyloCSF Frame 2
4.846
CNTI Index
noncoding
Max Probability
1
PhyloCSF Frame 3
0
CNTI Score
-0.444898912
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