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McDonnell Genome Institute
Washington University
Transcript
lnc-UBE2D3-3:1
Chromosome
chr4
Gene Name
lnc-UBE2D3-3
Start
102728745
CPC Label
coding
End
102730171
Cancer
BRCA-HER2-enriched
Strand
-
Peptide
TTSGYAGDLSSACGGLPSPSFGSGVGSSSFSRTSTTR
Modified Peptide
n[145]TTSGYAGDLSSACGGLPSPSFGSGVGSSSFSRTSTTR
Peptide Length
37
ORF Length
129
Open Reading Frame (ORF)
LQHRGLAVKDANAKLSKLEAALQQAKQDMAWQLLEYQELMNIKLALDIEIATYRKLLEGEESQLDSGMQNMSIHTKTTSGYAGDLSSACGGLPSPSFGSGVGSSSFSRTSTTRAVVVKKIETHDGRLVS
Conservation Score
1
PhyloCSF Frame 1
0
No. of Spectra
64
CPC Coding Probability
0.996033
PhyloCSF Frame 2
0
CNTI Index
coding
Max Probability
0.6758
PhyloCSF Frame 3
0
CNTI Score
0.781547299
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