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McDonnell Genome Institute
Washington University
Transcript
lnc-TTR-1:2
Chromosome
chr18
Gene Name
lnc-TTR-1
Start
31684724
CPC Label
noncoding
End
31687859
Cancer
BRCA-HER2-enriched
Strand
+
Peptide
EVMNAEEAK
Modified Peptide
n[145]EVMNAEEAK
Peptide Length
9
ORF Length
44
Open Reading Frame (ORF)
MQAKEVMNAEEAKIVIFPSPIPLFIYLYLHQLDWLFTKLIPPYH
Conservation Score
0.173
PhyloCSF Frame 1
-4.913
No. of Spectra
1
CPC Coding Probability
0.0722119
PhyloCSF Frame 2
-5.773
CNTI Index
coding
Max Probability
0.9952
PhyloCSF Frame 3
-2.247
CNTI Score
0.779526183
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