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McDonnell Genome Institute
Washington University
Transcript
lnc-TTPA-6:1
Chromosome
chr8
Gene Name
lnc-TTPA-6
Start
63136222
CPC Label
noncoding
End
63138084
Cancer
BRCA-HER2-enriched
Strand
-
Peptide
SKMDETDASSAVK
Modified Peptide
n[145]SKMDETDASSAVK
Peptide Length
13
ORF Length
56
Open Reading Frame (ORF)
MRGFRLVEGILHAPDAGWGNLVYVFNYPKDNKSKMDETDASSAVKVKSFGCPVENN
Conservation Score
1
PhyloCSF Frame 1
0
No. of Spectra
3
CPC Coding Probability
0.0982076
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.9613
PhyloCSF Frame 3
0
CNTI Score
-0.336087161
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