top of page
McDonnell Genome Institute
Washington University
Transcript
lnc-TSPAN11-5:1
Chromosome
chr12
Gene Name
lnc-TSPAN11-5
Start
30200982
CPC Label
noncoding
End
30217916
Cancer
LUAD
Strand
+
Peptide
GGTMVEK
Modified Peptide
n[230]GGTMVEK
Peptide Length
7
ORF Length
39
Open Reading Frame (ORF)
MVLPDAQFGRLVRGGTMVEKKHSFLVFPNCGYDHKGDHL
Conservation Score
0.439
PhyloCSF Frame 1
-5.159
No. of Spectra
13
CPC Coding Probability
0.0364386
PhyloCSF Frame 2
-4.349
CNTI Index
noncoding
Max Probability
0.9998
PhyloCSF Frame 3
-3.345
CNTI Score
-0.365234323
bottom of page