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McDonnell Genome Institute
Washington University
Transcript
lnc-TRPM1-1:22
Chromosome
chr15
Gene Name
lnc-TRPM1-1
Start
31214239
CPC Label
noncoding
End
31229382
Cancer
OV
Strand
-
Peptide
APPDGSHLLGGGR
Modified Peptide
n[145]APPDGSHLLGGGR
Peptide Length
13
ORF Length
250
Open Reading Frame (ORF)
LEADVHFAHFNISSPAGLGPGKRQGCGFPPPLPQPFSPAPLLLLPPLLPLLLSRTPPFFLAHLSALLAPFFCPSPSASPFPSASPSPSPGPLPPVPPPCPPPPPRGPRPGNLARPGRLRWGARGGSGAHPLRLPRAPPDGSHLLGGGRWILGLGLRRQEGKWVSAGPRQGCCCAWKGARGAGGLSQARRQERPRVTLQAQRGRAAACTGARACGERLSGAARMDCVPLPGHGSGRRGPGALLSPSDVPKA
Conservation Score
0.494
PhyloCSF Frame 1
0
No. of Spectra
1
CPC Coding Probability
0.162582
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.6654
PhyloCSF Frame 3
0.209
CNTI Score
-0.248244166
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