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McDonnell Genome Institute
Washington University
Transcript
lnc-TRAM1L1-7:1
Chromosome
chr4
Gene Name
lnc-TRAM1L1-7
Start
117575031
CPC Label
coding
End
117576108
Cancer
BRCA-HER2-enriched
Strand
-
Peptide
VEEMICGLIK
Modified Peptide
n[145]VEEMICGLIK
Peptide Length
10
ORF Length
184
Open Reading Frame (ORF)
MDRAAVARVGAVVSASVCALVAGVVLAQYIFTLKRKTGRKTKIIEMMPEFQKSSVRIKNLTRVEEMICGLIKGGAAKLQIITDFDMTLSRFSYKGKRCPTCHNSIDNCQLITDECRKKLLQLKKKYYAIEVDPVLTVEEKYPYMVEWYTKSHGLLVQQALPKAKLKEIVAESDVMLKERYEEFL
Conservation Score
1
PhyloCSF Frame 1
0
No. of Spectra
14
CPC Coding Probability
0.945357
PhyloCSF Frame 2
0
CNTI Index
coding
Max Probability
0.9681
PhyloCSF Frame 3
0
CNTI Score
0.710023733
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