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McDonnell Genome Institute
Washington University
Transcript
lnc-TPO-12:1
Chromosome
chr2
Gene Name
lnc-TPO-12
Start
2298238
CPC Label
noncoding
End
2306115
Cancer
BRCA-Luminal A
Strand
+
Peptide
REAACLK
Modified Peptide
n[145]REAACLK
Peptide Length
7
ORF Length
135
Open Reading Frame (ORF)
LCSGSSQQAPLDRAHILEDTVLRTIHLPTETKRRRLTPNKPRAGRREAACLKMTTVHSCVIIETIAKDSHLPSQRTTYVTRHSRKNLPRLLLHTLKNIEQHVTSKCPDLTTVVPAAGSCQQSQDFCFVFLIRSVS
Conservation Score
0.236
PhyloCSF Frame 1
-4.245
No. of Spectra
3
CPC Coding Probability
0.121219
PhyloCSF Frame 2
-3.445
CNTI Index
noncoding
Max Probability
0.9991
PhyloCSF Frame 3
-3.432
CNTI Score
-0.383347174
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