top of page
McDonnell Genome Institute
Washington University
Transcript
lnc-TMEM106C-3:1
Chromosome
chr12
Gene Name
lnc-TMEM106C-3
Start
47905104
CPC Label
noncoding
End
47907598
Cancer
BRCA-Luminal B
Strand
+
Peptide
ELSLSFPGPWSRVPPSPPAPWHRR
Modified Peptide
n[145]ELSLSFPGPWSRVPPSPPAPWHRR
Peptide Length
24
ORF Length
85
Open Reading Frame (ORF)
LLLLQNARKLSLIPQIRVKYPGGPKWKPELRHCSHPISPWQRPRLTTFPACRESHPRELSLSFPGPWSRVPPSPPAPWHRREGKR
Conservation Score
0.968
PhyloCSF Frame 1
0
No. of Spectra
2
CPC Coding Probability
0.149592
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.7253
PhyloCSF Frame 3
1.986
CNTI Score
-0.304977514
bottom of page