top of page
McDonnell Genome Institute
Washington University
Transcript
lnc-TGFA-1:1
Chromosome
chr2
Gene Name
lnc-TGFA-1
Start
70401994
CPC Label
noncoding
End
70403798
Cancer
OV
Strand
-
Peptide
LLQLLCGMGVK
Modified Peptide
n[145]LLQLLCGMGVK
Peptide Length
11
ORF Length
112
Open Reading Frame (ORF)
LLQLLCGMGVKFPGQSSCVPRRIMAASAESCRLSGKWGKASSHRPHPAPMQSKGPFSLPPCPLSATALSLFSDSGQAGLRTCPMLPTFQLQKKRALVLPAPVESTCRICALP
Conservation Score
0.462
PhyloCSF Frame 1
0
No. of Spectra
40
CPC Coding Probability
0.232594
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.9785
PhyloCSF Frame 3
0
CNTI Score
-0.363772342
bottom of page