top of page
McDonnell Genome Institute
Washington University
Transcript
lnc-TBL1XR1-16:1
Chromosome
chr3
Gene Name
lnc-TBL1XR1-16
Start
175977496
CPC Label
noncoding
End
175978570
Cancer
BRCA-Luminal B
Strand
-
Peptide
KLWMTSR
Modified Peptide
n[145]KLWM[147]TSR
Peptide Length
7
ORF Length
111
Open Reading Frame (ORF)
LPSRKLWMTSRRSCARSPWTWIRRWPCLASSSFLEKSYELPYIQVITICNQLFCCPKALFQPSFLGMKSCGIHETTFNSIMKCDMDIHKDLYVNTVLSGSTTMYPSIANRM
Conservation Score
1
PhyloCSF Frame 1
0
No. of Spectra
1
CPC Coding Probability
0.357349
PhyloCSF Frame 2
0
CNTI Index
coding
Max Probability
0.6156
PhyloCSF Frame 3
0
CNTI Score
0.688789359
bottom of page