top of page

McDonnell Genome Institute

Washington University

Transcript

lnc-SUMF1-8:1

Chromosome

chr3

Gene Name

lnc-SUMF1-8

Start

5690542

CPC Label

noncoding

End

5699338

Cancer

PRAD

Strand

-

Peptide

MNKPGLSAMQEETGWQLGER

Modified Peptide

M[147]NKPGLSAM[147]QEETGWQLGER

Peptide Length

20

ORF Length

46

Open Reading Frame (ORF)

MNKPGLSAMQEETGWQLGERILTYHGDQVTLCTDPELKVFQHTRHP

Conservation Score

0.049

PhyloCSF Frame 1

0

No. of Spectra

4

CPC Coding Probability

0.161343

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.6266

PhyloCSF Frame 3

0

CNTI Score

-0.387766178

Follow Us:

  • Twitter Clean
bottom of page