top of page
McDonnell Genome Institute
Washington University
Transcript
lnc-SUMF1-5:2
Chromosome
chr3
Gene Name
lnc-SUMF1-5
Start
5137628
CPC Label
coding
End
5187338
Cancer
BRCA-Luminal B
Strand
-
Peptide
ISEQTVEEGSAHK
Modified Peptide
n[145]ISEQTVEEGSAHK
Peptide Length
13
ORF Length
49
Open Reading Frame (ORF)
MISEQTVEEGSAHKRKESFVIGKSKLKWGRGRGYNLLRVIIKLTHLGRL
Conservation Score
0.072
PhyloCSF Frame 1
0
No. of Spectra
14
CPC Coding Probability
0.832983
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.9977
PhyloCSF Frame 3
0
CNTI Score
-0.326856421
bottom of page