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McDonnell Genome Institute
Washington University
Transcript
lnc-SRGAP2C-5:1
Chromosome
chr1
Gene Name
lnc-SRGAP2C-5
Start
121396753
CPC Label
noncoding
End
121463129
Cancer
HCC
Strand
+
Peptide
VALPVEAVGEK
Modified Peptide
VALPVEAVGEK
Peptide Length
11
ORF Length
100
Open Reading Frame (ORF)
LHRVALPVEAVGEKKEGGGGGDAAATEGGTGAAASRALQQCGQLQKLIVIFIGSLCGLCTKCAVSNDLTQQEIQTLELGDDILIYEMQEDVMCGTSMKTD
Conservation Score
1
PhyloCSF Frame 1
0
No. of Spectra
1
CPC Coding Probability
0.153303
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.9063
PhyloCSF Frame 3
0
CNTI Score
-0.272690797
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