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McDonnell Genome Institute
Washington University
Transcript
lnc-SPERT-3:1
Chromosome
chr13
Gene Name
lnc-SPERT-3
Start
45671844
CPC Label
noncoding
End
45672391
Cancer
BRCA-HER2-enriched
Strand
+
Peptide
ASWSNLSMDEK
Modified Peptide
n[145]ASWSNLSM[147]DEK
Peptide Length
11
ORF Length
104
Open Reading Frame (ORF)
LYLLKQSKANHKEWLLTPLPDVAYLSPLSASQEDLKEKEKASWSNLSMDEKVELCCIQFNRSFSGINRGMKKWKMVVGTAMFFGFTALVLIREKHCVWSHPTRL
Conservation Score
1
PhyloCSF Frame 1
0
No. of Spectra
2
CPC Coding Probability
0.0926019
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.9987
PhyloCSF Frame 3
0
CNTI Score
-0.336950448
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