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McDonnell Genome Institute
Washington University
Transcript
lnc-SOX30-3:2
Chromosome
chr5
Gene Name
lnc-SOX30-3
Start
157711732
CPC Label
noncoding
End
157731684
Cancer
BRCA-Luminal B
Strand
-
Peptide
LLLPPPVLR
Modified Peptide
n[145]LLLPPPVLR
Peptide Length
9
ORF Length
77
Open Reading Frame (ORF)
LLLPPPVLRQISLTRFLKIIFYLLVLTYWQKQSVSPLVPRSKSYPNLKKKKKKKILFLVFEGVAVMFPLFLVAFINL
Conservation Score
0.793
PhyloCSF Frame 1
0
No. of Spectra
88
CPC Coding Probability
0.178342
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.9979
PhyloCSF Frame 3
0
CNTI Score
-0.303205313
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