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McDonnell Genome Institute
Washington University
Transcript
lnc-SNAPC3-11:1
Chromosome
chr9
Gene Name
lnc-SNAPC3-11
Start
14314231
CPC Label
noncoding
End
14359244
Cancer
OSCC
Strand
+
Peptide
ASQTMEGGK
Modified Peptide
n[145]ASQTM[147]EGGK
Peptide Length
9
ORF Length
148
Open Reading Frame (ORF)
LQPRWLAPNPHPPGPGAPAESVSLPARVQAGRGRGAPGAAGRAGGRARAAAALQRLRALSRSAPAPAPHRGAAPPPPRRPCRLRVNELDSRDFEEGGSPCTLSAPPAHIHTPPPKSSFLLGVDGDEGEAKASQTMEGGKVSAWGSEST
Conservation Score
1
PhyloCSF Frame 1
0.823
No. of Spectra
3
CPC Coding Probability
0.161211
PhyloCSF Frame 2
3.159
CNTI Index
coding
Max Probability
0.5442
PhyloCSF Frame 3
0.727
CNTI Score
0.694655637
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