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McDonnell Genome Institute
Washington University
Transcript
lnc-SNAP25-4:1
Chromosome
chr20
Gene Name
lnc-SNAP25-4
Start
10309629
CPC Label
noncoding
End
10312102
Cancer
BRCA-Luminal A
Strand
+
Peptide
LGTERLTIYK
Modified Peptide
n[145]LGTERLTIYK
Peptide Length
10
ORF Length
78
Open Reading Frame (ORF)
LSFHYISSPVLSIGKTALGETKSKQTKQGKFLALTELTLKLGTERLTIYKGYGMVNVVEKCNTMKGVQSIRGRTEGVS
Conservation Score
0.417
PhyloCSF Frame 1
-3.848
No. of Spectra
1
CPC Coding Probability
0.0697269
PhyloCSF Frame 2
-4.945
CNTI Index
noncoding
Max Probability
0.7526
PhyloCSF Frame 3
-4.83
CNTI Score
-0.413806513
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