top of page
McDonnell Genome Institute
Washington University
Transcript
lnc-SLC43A1-1:1
Chromosome
chr11
Gene Name
lnc-SLC43A1-1
Start
57476492
CPC Label
noncoding
End
57477534
Cancer
HCC
Strand
-
Peptide
FSPGALK
Modified Peptide
n[230]FSPGALK
Peptide Length
7
ORF Length
52
Open Reading Frame (ORF)
LIFTTQGPQWRGKFSPGALKSVQGRLRRKVFLQCQEVEGTRVSRGQGQPGPD
Conservation Score
1
PhyloCSF Frame 1
-3.506
No. of Spectra
30
CPC Coding Probability
0.199151
PhyloCSF Frame 2
-2.918
CNTI Index
noncoding
Max Probability
0.9976
PhyloCSF Frame 3
3.915
CNTI Score
-0.311144585
bottom of page