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McDonnell Genome Institute
Washington University
Transcript
lnc-SLC29A4-5:5
Chromosome
chr7
Gene Name
lnc-SLC29A4-5
Start
5424057
CPC Label
noncoding
End
5449180
Cancer
HCC
Strand
+
Peptide
AGAGVGK
Modified Peptide
n[230]AGAGVGK
Peptide Length
7
ORF Length
150
Open Reading Frame (ORF)
LRGQNSPQRDRRLAILMLGPQARSRQVPPPHFGRRDFEKKAGRAGAGVGKGNSRKGPGTGALEPWWPPRPDPPLDRCKDSGSGPKDPNTFLSSPFNLLSAESKLMPAAETSFRRRAGLGISLALAAFLGGEEGKAGEGRETGLEGARRFT
Conservation Score
0.102
PhyloCSF Frame 1
-2.801
No. of Spectra
6
CPC Coding Probability
0.294431
PhyloCSF Frame 2
-2.465
CNTI Index
noncoding
Max Probability
0.9191
PhyloCSF Frame 3
-2.675
CNTI Score
-0.247997602
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