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McDonnell Genome Institute
Washington University
Transcript
lnc-SLC25A45-1:1
Chromosome
chr11
Gene Name
lnc-SLC25A45-1
Start
65308986
CPC Label
noncoding
End
65314137
Cancer
BRCA-Luminal B
Strand
-
Peptide
EMGEIQVPR
Modified Peptide
n[145]EMGEIQVPR
Peptide Length
9
ORF Length
119
Open Reading Frame (ORF)
LLSIYQVPSAVLVPGDSASGLGPAAQRREMGEIQVPRYIMIPFQVASPSWKLPSPAAIAPPWDLGDGVGSPLRQHWPDWRDQQGSSLLPPGRLKPALHGHETWNPGPWGAGEMTGTWGL
Conservation Score
1
PhyloCSF Frame 1
-4.52
No. of Spectra
6
CPC Coding Probability
0.141575
PhyloCSF Frame 2
-3.736
CNTI Index
noncoding
Max Probability
0.9988
PhyloCSF Frame 3
-3.391
CNTI Score
-0.360588708
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