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McDonnell Genome Institute
Washington University
Transcript
lnc-RPS27A-1:15
Chromosome
chr2
Gene Name
lnc-RPS27A-1
Start
55314161
CPC Label
noncoding
End
55315525
Cancer
HCC
Strand
+
Peptide
VAVFHSLPCALSK
Modified Peptide
n[230]VAVFHSLPCALSK
Peptide Length
13
ORF Length
67
Open Reading Frame (ORF)
LTALPRMGLFYALFQIKSVFSSRKVAVFHSLPCALSKLPGTGTREGEEEWEEPQDKMPQTTTVPSQG
Conservation Score
0.847
PhyloCSF Frame 1
-4.648
No. of Spectra
5
CPC Coding Probability
0.0439626
PhyloCSF Frame 2
-4.357
CNTI Index
noncoding
Max Probability
0.998
PhyloCSF Frame 3
-4.2
CNTI Score
-0.402134896
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