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McDonnell Genome Institute
Washington University
Transcript
lnc-RBM33-6:2
Chromosome
chr7
Gene Name
lnc-RBM33-6
Start
155962631
CPC Label
coding
End
155966343
Cancer
EOGC
Strand
+
Peptide
AGETLGEGLGQGPLSLAVTAWVNCLAGLAAR
Modified Peptide
n[145]AGETLGEGLGQGPLSLAVTAWVNCLAGLAAR
Peptide Length
31
ORF Length
352
Open Reading Frame (ORF)
LVKEGFLEEVTARLGLKDEWEERGEHVDKARQKGCTAKSQPRRNAGRVLEAACFMLLGSVEGQAGARQLSSLANGATEDSKQDLCSRLHCLWVEPREIDNIRPFRAKTNASFAGCSLTERLLGGLCRGWMSRGHPPEPAWGPGSEAIGPVVSRFSCRLGERGGSRNTEEVKRQSRGDGVPQRRRSTEAEVQACRHVDHEYSARSVGVSSELHQFPGYLGPWITLRSATCQLISKLLLAGLRLSREHLGEPCAAGWTPAHLADYSCFCSPVCPQEVRACLLFLHDHGRRGTNMRVLASPQWWLPRAGETLGEGLGQGPLSLAVTAWVNCLAGLAARAQKAEALPAFSSHPAPM
Conservation Score
0.204
PhyloCSF Frame 1
-3.505
No. of Spectra
2
CPC Coding Probability
0.996455
PhyloCSF Frame 2
-3.086
CNTI Index
noncoding
Max Probability
0.1027
PhyloCSF Frame 3
-3.751
CNTI Score
-0.336212975
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