top of page
McDonnell Genome Institute
Washington University
Transcript
lnc-PRR20E-3:1
Chromosome
chr13
Gene Name
lnc-PRR20E-3
Start
57314738
CPC Label
noncoding
End
57315909
Cancer
BRCA-HER2-enriched
Strand
+
Peptide
AAGAPIEWLK
Modified Peptide
n[145]AAGAPIEWLK
Peptide Length
10
ORF Length
81
Open Reading Frame (ORF)
LAGGVVTAISKAAGAPIEWLKLLLQVQHATKEITTDKQYKHIIDCVVCIPKEERVLSFWRGNLANVIRYFPTQGLSTSPSK
Conservation Score
1
PhyloCSF Frame 1
0
No. of Spectra
3
CPC Coding Probability
0.434206
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.4761
PhyloCSF Frame 3
0
CNTI Score
-0.315724244
bottom of page